PWS 588
Metagenomics
Plant and Wildlife Sciences
College of Life Sciences
Course Description
Introduction to comparative and fuctional analysis of genomic and metagenomic datasets, including microbial functions that affect host health. Analyzing existing and novel datasets with field-standard techniques.
When Taught
Winter Odd Years
Grade Rule
Grade Rule 8: A, B, C, D, E, I (Standard grade rule)
Min
3
Fixed
3
Fixed
3
Fixed
0
Other Prerequisites
Introductory coding and mommand-line experience (e.g. Bio 664 for grad students or seek instructor's consent); strongly recommend Bio/MMBio/PWS 468 or corresponding graduate sections.
Title
Application of a broad knowledge base in genome biology
Learning Outcome
Students can apply basic concepts in genetics, molecular biology, and bioinformatics in solving metagenomics problems.
Title
Deep knowledge skills in metagenomics
Learning Outcome
Students will demonstrate expanded understanding of metagenomic and comparative genomic theories and techniques.
Title
Laboratory skills in metagenomics
Learning Outcome
Students can predict metagenomic content from samples, and compare genomic and metagenomic content across samples.
Title
Computational research management skills
Learning Outcome
Students can assemble and annotate genomes, including targeted shotgun metagenomes.
Title
Literature analysis and writing skills
Learning Outcome
Students can analyze, interpret, and present methodology and results of their own creation in the format of primary literature.
